I am on the same meds as you. I will say up front I have not had the exact same issues as you, but try not to worry too much. I am not using Q caps for some reason. Also, I was given some diluent in 1ml bottles, and all the rest are 2ml bottles, even though we are only using 75 of Menopur. It was driving me crazy that things did not seem like they were happening the way I expected.
Can you call your pharmacy? I believe many of them have customer service numbers you can call for advice. We thought we were messing up with the Follistim. I was convinced I was doing it all wrong, and would get no follies to grow. Instead, we are having a good response. Also, I used Cetrotide (like Ganirelix) for the 2nd time last night. The first night, the syringe was very hard to manipulate, and when we tried to get an air bubble out, we pushed slowly, slowly, then all of the sudden the syringe moved a lot, and some squirted out. I was panicked - but I asked the nurse about it yesterday, and she said it was fine and had barely any reaction when I told her. I was worried I did not get enough of the medication. Then last night, a bit leaked out when I did it.
You probably did fine, even though it might feel like there were mistakes. Hope you can call and ask your pharmacy to be sure. Best of luck to you.